BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022C04SP1|AL427876
(824 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig533 1631 0.0
>3x_Contig533
Length = 2268
Score = 1631 bits (823), Expect = 0.0
Identities = 823/823 (100%)
Strand = Plus / Plus
Query: 2 taaatgacatagtattcaaatgaccgttactatgaatggcccgtatgagttactgctttt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 taaatgacatagtattcaaatgaccgttactatgaatggcccgtatgagttactgctttt 74
Query: 62 cggtttgatcgagacctttcgttaattgctgatgatgtgcagtagaaacgaaatctcaag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 cggtttgatcgagacctttcgttaattgctgatgatgtgcagtagaaacgaaatctcaag 134
Query: 122 tacctaatttttttttcactttcttatataagtcttgcatacgcatacagcggagggata 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tacctaatttttttttcactttcttatataagtcttgcatacgcatacagcggagggata 194
Query: 182 tatacatatgaatatactatacgcagtacgaatgaccaggattagcggaaattttccagt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tatacatatgaatatactatacgcagtacgaatgaccaggattagcggaaattttccagt 254
Query: 242 tgctaaaattcagaggtcgaagtttccctttgttgaggcgaaatcagctcaatcctagtg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgctaaaattcagaggtcgaagtttccctttgttgaggcgaaatcagctcaatcctagtg 314
Query: 302 tgtggatatatatacatatatatcacgtgacctagatggtttcttgaaagaacttcgaaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tgtggatatatatacatatatatcacgtgacctagatggtttcttgaaagaacttcgaaa 374
Query: 362 gtctccaaccatcactgtctataaattgatccacatatagagtctttgtaagtgcacatt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gtctccaaccatcactgtctataaattgatccacatatagagtctttgtaagtgcacatt 434
Query: 422 gctagcttggtatttttcggaaaaggatgtatgactggtggtggttggtgttgtatcttg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gctagcttggtatttttcggaaaaggatgtatgactggtggtggttggtgttgtatcttg 494
Query: 482 tctctctctcccatatcgttaaattttatctagaagcttcctgctcttctgttttatatt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tctctctctcccatatcgttaaattttatctagaagcttcctgctcttctgttttatatt 554
Query: 542 taaaggtaaccttgaaatttgaagcagttacagaaaatgttaataacaaatattgcgttc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 taaaggtaaccttgaaatttgaagcagttacagaaaatgttaataacaaatattgcgttc 614
Query: 602 acatacaaactgttactcaaacaaagagagtacaattggaacaaattacacttaaaccgc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 acatacaaactgttactcaaacaaagagagtacaattggaacaaattacacttaaaccgc 674
Query: 662 caattaccaatcaataaatcaaattaacatgtcagttcacactccagaagttttatgggc 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 caattaccaatcaataaatcaaattaacatgtcagttcacactccagaagttttatgggc 734
Query: 722 tcaacgttcaagcgaatccgatgataccaagaacaatttgttcattaccatcaatattcc 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tcaacgttcaagcgaatccgatgataccaagaacaatttgttcattaccatcaatattcc 794
Query: 782 agactgtacgaaccctaaaatggaattaaccgaaaattctttg 824
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 agactgtacgaaccctaaaatggaattaaccgaaaattctttg 837
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8299
Number of Sequences: 1807
Number of extensions: 8299
Number of successful extensions: 121
Number of sequences better than 1.0e-20: 1
length of query: 824
length of database: 10,358,551
effective HSP length: 16
effective length of query: 808
effective length of database: 10,329,639
effective search space: 8346348312
effective search space used: 8346348312
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)